So right off the bat it's a tall engine at about 29". But is that a show stopper? The highest point is the high pressure pump at the back of the block. It looks like without the plastic cover the rest of the engine might be closer to 27". Still tall but something to chew on.

Another issue is transmission. The MT82 from the Mustang is not well liked and it's very large. Well after some web trolling I found where an individual discovered a NC Miata 6spd bolts right up with a Focus ST clutch. Very promising.
